MRIQC: individual T2w report

Summary

  • BIDS filename: sub-01_ses-03_T2w.
  • Date and time: 2018-10-11, 01:37.
  • MRIQC version: 0.14.2.

Visual reports

Zoomed-in (brain mask)
Background noise
Approximate spatial normalization
Brain mask
Brain tissue segmentation
Artifacts in background
Head outline
"Hat" mask
Distribution of the noise in the background

Other

cjv0.4930485936502033
cnr2.6939453984614707
efc0.5416628577659556
fber1574.2545166015625
fwhmavg2.9949988069690243
fwhmx2.931684011108457
fwhmy3.285774951038138
fwhmz2.7675374587604784
icvscsf0.18987161089156113
icvsgm0.4200466222396893
icvswm0.39008176686874957
inumed1.4516816139221191
inurange0.25636539459228525
qi10.0
qi20.007807838251281945
rpvecsf28.789216602007407
rpvegm12.93969311272597
rpvewm15.398932752518377
sizex208
sizey300
sizez320
snrcsf5.8641095848599525
snrgm8.273184873041096
snrtotal7.069396587173666
snrwm7.0708953036199516
snrdcsf211.59688963185977
snrdgm94.35954223673609
snrdtotal120.8832748088414
snrdwm56.69339255792835
spacingx0.8000043630599976
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk12.717126092934857
summarybgmad11.555115699768066
summarybgmean24.535810470581055
summarybgmedian19.52225112915039
summarybgn7109301.0
summarybgp056.100480556488037
summarybgp9560.038448333740234
summarybgstdv18.679210662841797
summarycsfk3.6771972446038728
summarycsfmad513.95751953125
summarycsfmean3725.48779296875
summarycsfmedian3732.087890625
summarycsfn125564.0
summarycsfp052666.68212890625
summarycsfp954663.759301757812
summarycsfstdv636.4262084960938
summarygmk0.5905321268595105
summarygmmad188.81787109375
summarygmmean1677.771240234375
summarygmmedian1664.2877197265625
summarygmn69142.0
summarygmp051373.9764221191406
summarygmp952032.8614990234373
summarygmstdv201.16505432128906
summarywmk0.1650993969111596
summarywmmad138.73660278320312
summarywmmean992.9434814453125
summarywmmedian999.9425048828125
summarywmn325664.0
summarywmp05748.9343292236327
summarywmp951213.0039550781248
summarywmstdv141.4164581298828
tpmoverlapcsf0.19095106422901154
tpmoverlapgm0.4590304493904114
tpmoverlapwm0.5109215378761292
wm2max0.21373138742254852
AccelFactPE2
AcquisitionNumber1
AcquisitionTime19:51:39.647500
BodyPartExaminedHEAD
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20170624 (OpenJPEG build) MSC1900
DeviceSerialNumber67064
EchoTime0.563
EchoTrainLength314
FlipAngle120
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM']
InstitutionAddressScott_Ave_4525_St._Louis_MO_US_63110
InstitutionNameWashington_University
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
PhaseEncodingDirectioni-
PhaseEncodingLines300
ProcedureStepDescriptionhead_Braver
ProtocolNameT2w_SPC
RepetitionTime3.2
ScanningSequenceSE
SequenceName_spc_314ns
SequenceVariantSK_SP
SeriesDescriptionT2w_SPC
SoftwareVersionssyngo_MR_E11
md5sum1d1d26583c85e56092bdfe6e90461366
softwaremriqc
version0.14.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.